CRAN/E | latentcor

latentcor

Fast Computation of Latent Correlations for Mixed Data

Installation

About

The first stand-alone R package for computation of latent correlation that takes into account all variable types (continuous/binary/ordinal/zero-inflated), comes with an optimized memory footprint, and is computationally efficient, essentially making latent correlation estimation almost as fast as rank-based correlation estimation. The estimation is based on latent copula Gaussian models. For continuous/binary types, see Fan, J., Liu, H., Ning, Y., and Zou, H. (2017). For ternary type, see Quan X., Booth J.G. and Wells M.T. (2018) . For truncated type or zero-inflated type, see Yoon G., Carroll R.J. and Gaynanova I. (2020) doi:10.1093/biomet/asaa007. For approximation method of computation, see Yoon G., Müller C.L. and Gaynanova I. (2021) doi:10.1080/10618600.2021.1882468. The latter method uses multi-linear interpolation originally implemented in the R package .

Key Metrics

Version 2.0.1
R ≥ 3.0.0
Published 2022-09-05 599 days ago
Needs compilation? yes
License GPL-3
CRAN checks latentcor results

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Maintainer

Maintainer

Mingze Huang

mingzehuang@gmail.com

Authors

Mingze Huang

aut / cre

Grace Yoon

aut

Christian Müller

aut

Irina Gaynanova

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

latentcor
Mathematical Framework for latentcor

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

latentcor archive

Depends

R ≥ 3.0.0

Imports

stats
pcaPP
fMultivar
mnormt
Matrix
MASS
heatmaply
ggplot2
plotly
graphics
geometry
doFuture
foreach
future
doRNG
microbenchmark

Suggests

rmarkdown
markdown
knitr
testthat ≥ 3.0.0
lattice
cubature
plot3D
covr