CRAN/E | kinship2

kinship2

Pedigree Functions

Installation

About

Routines to handle family data with a pedigree object. The initial purpose was to create correlation structures that describe family relationships such as kinship and identity-by-descent, which can be used to model family data in mixed effects models, such as in the coxme function. Also includes a tool for pedigree drawing which is focused on producing compact layouts without intervention. Recent additions include utilities to trim the pedigree object with various criteria, and kinship for the X chromosome.

cran.r-project.org/package=kinship2

Key Metrics

Version 1.9.6.1
R ≥ 3.6.0
Published 2024-03-24 32 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks kinship2 results

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Maintainer

Maintainer

Jason Sinnwell

sinnwell.jason@mayo.edu

Authors

Jason Sinnwell

aut / cre

Terry Therneau

aut

Daniel Schaid

ctb

Elizabeth Atkinson

ctb

Carly Mester

ctb

Material

README
NEWS
Reference manual
Package source

In Views

Agriculture
MixedModels

Vignettes

Pedigree_plot_alignment_details
Kinship_Matrix_Code_Details
Pedigree_Examples
Pedigree_constructor_details
Pedigree_Plot_Details

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

kinship2 archive

Depends

R ≥ 3.6.0
Matrix
quadprog

Imports

graphics
stats
methods
knitr

Reverse Depends

FamAgg
Familias
GESE
pedgene

Reverse Imports

BGmisc
famSKATRC
fat2Lpoly
GENLIB
LCAextend
Mega2R
MESS
paramlink
pedtools
ribd
RVS
skater

Reverse Suggests

coxme
gap
Mangrove
pbatR
pedmod
sequoia
simfam