CRAN/E | junctions

junctions

The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages

Installation

About

Individual based simulations of hybridizing populations, where the accumulation of junctions is tracked. Furthermore, mathematical equations are provided to verify simulation outcomes. Both simulations and mathematical equations are based on Janzen (2018, doi:10.1101/058107) and Janzen (2020, doi:10.1101/2020.09.10.292441).

Citation junctions citation info
Bug report File report

Key Metrics

Version 2.1.0
Published 2024-02-13 80 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks junctions results

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Maintainer

Maintainer

Thijs Janzen

thijsjanzen@gmail.com

Authors

Thijs Janzen

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

Overview_of_the_junctions_package
junctions
phasing

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

junctions archive

Depends

RcppParallel ≥ 5.0.0

Imports

nloptr
Rcpp
tibble

Suggests

dplyr
ggplot2
knitr
magrittr
rmarkdown
testthat
tidyr

LinkingTo

nloptr
Rcpp
RcppParallel

Reverse Suggests

GenomeAdmixR