CRAN/E | jeek

jeek

A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models

Installation

About

Provides a fast and scalable joint estimator for integrating additional knowledge in learning multiple related sparse Gaussian Graphical Models (JEEK). The JEEK algorithm can be used to fast estimate multiple related precision matrices in a large-scale. For instance, it can identify multiple gene networks from multi-context gene expression datasets. By performing data-driven network inference from high-dimensional and heterogeneous data sets, this tool can help users effectively translate aggregated data into knowledge that take the form of graphs among entities. Please run demo(jeek) to learn the basic functions provided by this package. For further details, please read the original paper: Beilun Wang, Arshdeep Sekhon, Yanjun Qi "A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models" (ICML 2018) .

github.com/QData/jeek
Bug report File report

Key Metrics

Version 1.1.1
R ≥ 3.0.0
Published 2018-07-07 2127 days ago
Needs compilation? no
License GPL-2
CRAN checks jeek results

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Maintainer

Maintainer

Beilun Wang

bw4mw@virginia.edu

Authors

Beilun Wang

aut / cre

Yanjun Qi

aut

Zhaoyang Wang

aut

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

jeek archive

Depends

R ≥ 3.0.0
lpSolve
pcaPP
igraph

Suggests

parallel