CRAN/E | haplo.stats

haplo.stats

Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous

Installation

About

Routines for the analysis of indirectly measured haplotypes. The statistical methods assume that all subjects are unrelated and that haplotypes are ambiguous (due to unknown linkage phase of the genetic markers). The main functions are: haplo.em(), haplo.glm(), haplo.score(), and haplo.power(); all of which have detailed examples in the vignette.

analytictools.mayo.edu/research/haplo-stats/

Key Metrics

Version 1.9.5.1
R ≥ 4.1.0
Published 2024-02-02 78 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks haplo.stats results

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Maintainer

Maintainer

Jason P. Sinnwell

sinnwell.jason@mayo.edu

Authors

Sinnwell JP
Schaid DJ

Material

README
NEWS
Reference manual
Package source

Vignettes

haplostats

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

haplo.stats archive

Depends

R ≥ 4.1.0
methods
stats
graphics
arsenal

Imports

rms

Suggests

R.rsp
testthat

Reverse Depends

haplo.ccs

Reverse Imports

BIGDAWG
IFP
pould
SNPassoc

Reverse Suggests

asymLD
gap
trio