CRAN/E | gquad

gquad

Prediction of G Quadruplexes and Other Non-B DNA Motifs

Installation

About

Genomic biology is not limited to the confines of the canonical B-forming DNA duplex, but includes over ten different types of other secondary structures that are collectively termed non-B DNA structures. Of these non-B DNA structures, the G-quadruplexes are highly stable four-stranded structures that are recognized by distinct subsets of nuclear factors. This package provide functions for predicting intramolecular G quadruplexes. In addition, functions for predicting other intramolecular nonB DNA structures are included.

Key Metrics

Version 2.1-2
R ≥ 4.2.0
Published 2022-11-29 525 days ago
Needs compilation? no
License Artistic-2.0
CRAN checks gquad results

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Maintainer

Maintainer

Hannah O. Ajoge

ohuajo@gmail.com

Authors

Hannah O. Ajoge

Material

Reference manual
Package source

Vignettes

Manuscript

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

gquad archive

Depends

R ≥ 4.2.0

Imports

ape ≥ 5.6-2
seqinr ≥ 4.2-23

Suggests

knitr
rmarkdown