CRAN/E | geneticae

geneticae

Statistical Tools for the Analysis of Multi Environment Agronomic Trials

Installation

About

Data from multi environment agronomic trials, which are often carried out by plant breeders, can be analyzed with the tools offered by this package such as the Additive Main effects and Multiplicative Interaction model or 'AMMI' ('Gauch' 1992, ISBN:9780444892409) and the Site Regression model or 'SREG' ('Cornelius' 1996, doi:10.1201/9780367802226). Since these methods present a poor performance under the presence of outliers and missing values, this package includes robust versions of the 'AMMI' model ('Rodrigues' 2016, doi:10.1093/bioinformatics/btv533), and also imputation techniques specifically developed for this kind of data ('Arciniegas-Alarcón' 2014, doi:10.2478/bile-2014-0006).

jangelini.github.io/geneticae/
Bug report File report

Key Metrics

Version 0.4.0
R ≥ 2.12.0
Published 2022-07-20 645 days ago
Needs compilation? no
License GPL-2
CRAN checks geneticae results
Language en-US

Downloads

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Maintainer

Maintainer

Julia Angelini

jangelini_93@hotmail.com

Authors

Julia Angelini

aut / cre

Marcos Prunello

aut

Gerardo Cervigni

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

How to use the geneticae package
How to use the geneticae Shiny App

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

geneticae archive

Depends

R ≥ 2.12.0

Imports

stats
GGEBiplots
ggforce
ggplot2
scales
MASS
pcaMethods
rrcov
dplyr
missMDA
calibrate
graphics
reshape2
matrixStats
tidyr
prettydoc
rlang

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