CRAN/E | gaston

gaston

Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models

Installation

About

Manipulation of genetic data (SNPs). Computation of GRM and dominance matrix, LD, heritability with efficient algorithms for linear mixed model (AIREML). Dandine et al doi:10.1159/000488519.

Key Metrics

Version 1.6
Published 2023-12-07 144 days ago
Needs compilation? yes
License GPL-3
CRAN checks gaston results

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Maintainer

Maintainer

Hervé Perdry

herve.perdry@universite-paris-saclay.fr

Authors

Hervé Perdry

cre / aut / cph

Claire Dandine-Roulland

aut / cph

Deepak Bandyopadhyay

cph

(C++ gzstream class)

Lutz Kettner

cph

(C++ gzstream class)

Material

NEWS
Reference manual
Package source

Vignettes

gaston faq
gaston package

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

gaston archive

Depends

Rcpp
RcppParallel
methods

Suggests

knitr
RcppEigen

LinkingTo

Rcpp
RcppParallel
RcppEigen

Reverse Depends

milorGWAS
Ravages

Reverse Imports

hierfstat
RAINBOWR
rNeighborGWAS
rNeighborQTL
snpsettest

Reverse Suggests

bigsnpr

Reverse LinkingTo

milorGWAS
Ravages