CRAN/E | gapmap

gapmap

Drawing Gapped Cluster Heatmap with 'ggplot2'

Installation

About

The gap encodes the distance between clusters and improves interpretation of cluster heatmaps. The gaps can be of the same distance based on a height threshold to cut the dendrogram. Another option is to vary the size of gaps based on the distance between clusters.

github.com/evanbiederstedt/gapmap
Bug report File report

Key Metrics

Version 0.1.0
Published 2021-04-19 713 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks gapmap results

Downloads

Last 24 hours 0 -100%
Last 7 days 71 -25%
Last 30 days 280 +7%
Last 90 days 743 -10%
Last 365 days 3.642 -30%

Maintainer

Maintainer

Evan Biederstedt

evan.biederstedt@gmail.com

Authors

Ryo Sakai

aut

Evan Biederstedt

cre / aut

Material

README
Reference manual
Package source

Vignettes

"An introduction to the gapmap package"
"Example with a TCGA dataset"

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

gapmap archive

Depends

ggplot2
reshape2

Imports

grid

Suggests

knitr
dendsort
RColorBrewer
rmarkdown

Reverse Suggests

dendsort