CRAN/E | fmcmc

fmcmc

A friendly MCMC framework

Installation

About

Provides a friendly (flexible) Markov Chain Monte Carlo (MCMC) framework for implementing Metropolis-Hastings algorithm in a modular way allowing users to specify automatic convergence checker, personalized transition kernels, and out-of-the-box multiple MCMC chains using parallel computing. Most of the methods implemented in this package can be found in Brooks et al. (2011, ISBN 9781420079425). Among the methods included, we have: Haario (2001) doi:10.1007/s11222-011-9269-5 Adaptive Metropolis, Vihola (2012) doi:10.1007/s11222-011-9269-5 Robust Adaptive Metropolis, and Thawornwattana et al. (2018) doi:10.1214/17-BA1084 Mirror transition kernels.

Citation fmcmc citation info
github.com/USCbiostats/fmcmc
Bug report File report

Key Metrics

Version 0.5-2
R ≥ 3.3.0
Published 2023-08-29 235 days ago
Needs compilation? no
License MIT
License File
CRAN checks fmcmc results
Language en-US

Downloads

Yesterday 23
Last 7 days 41 -27%
Last 30 days 275 -19%
Last 90 days 1.131 +20%
Last 365 days 4.112 +2%

Maintainer

Maintainer

George Vega Yon

g.vegayon@gmail.com

Authors

George Vega Yon

aut / cre

Paul Marjoram

ctb / ths

National Cancer Institute

fnd

(Grant Number 5P01CA196569-02)

Fabian Scheipl

rev

(JOSS reviewer)

Material

NEWS
ChangeLog
Reference manual
Package source

Vignettes

Advanced features
User-defined kernels
Workflow with fmcmc

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

fmcmc archive

Depends

R ≥ 3.3.0

Imports

parallel
coda
stats
methods
MASS
Matrix

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