CRAN/E | flowTraceR

flowTraceR

Tracing Information Flow for Inter-Software Comparisons in Mass Spectrometry-Based Bottom-Up Proteomics

Installation

About

Useful functions to standardize software outputs from ProteomeDiscoverer, Spectronaut, DIA-NN and MaxQuant on precursor, modified peptide and proteingroup level and to trace software differences for identifications such as varying proteingroup denotations for common precursor.

github.com/OKdll/flowTraceR

Key Metrics

Version 0.1.0
R ≥ 2.10
Published 2022-06-03 694 days ago
Needs compilation? no
License MIT
License File
CRAN checks flowTraceR results

Downloads

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Maintainer

Maintainer

Oliver Kardell

Okdll@gmx.net

Authors

Oliver Kardell

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

Example Retention Time Distribution
Requirements
Workflow

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 2.10

Imports

comprehenr
dplyr
ggplot2
magrittr
stringr
tibble
tidyr

Suggests

data.table
kableExtra
knitr
rmarkdown
testthat ≥ 3.0.0

Reverse Imports

mpwR