CRAN/E | fitode

fitode

Tools for Ordinary Differential Equations Model Fitting

Installation

About

Methods and functions for fitting ordinary differential equations (ODE) model in 'R'. Sensitivity equations are used to compute the gradients of ODE trajectories with respect to underlying parameters, which in turn allows for more stable fitting. Other fitting methods, such as MCMC (Markov chain Monte Carlo), are also available.

Key Metrics

Version 0.1.1
R ≥ 4.0
Published 2022-10-29 517 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks fitode results

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Maintainer

Maintainer

Sang Woo Park

swp2@princeton.edu

Authors

Sang Woo Park

aut / cre

Ben Bolker

aut

Material

README
Reference manual
Package source

Vignettes

Getting started with fitode package

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 4.0
bbmle

Imports

deSolve
Deriv
MASS
numDeriv
mvtnorm
coda
methods

Suggests

knitr
ggplot2
testthat ≥ 3.0.0