CRAN/E | fitPoly

fitPoly

Genotype Calling for Bi-Allelic Marker Assays

Installation

About

Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) doi:10.1186/1471-2105-12-172.

Key Metrics

Version 3.0.0
R ≥ 3.2.0
Published 2018-03-16 2234 days ago
Needs compilation? no
License GPL-2
CRAN checks fitPoly results

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Maintainer

Maintainer

Roeland E. Voorrips

roeland.voorrips@wur.nl

Authors

Roel
E. Voorrips
Gerrit Gort

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.2.0

Imports

foreach

Suggests

devEMF
doParallel
grDevices

Reverse Suggests

mappoly