CRAN/E | fido

fido

Bayesian Multinomial Logistic Normal Regression

Installation

About

Provides methods for fitting and inspection of Bayesian Multinomial Logistic Normal Models using MAP estimation and Laplace Approximation as developed in Silverman et. Al. (2022) . Key functionality is implemented in C++ for scalability. 'fido' replaces the previous package 'stray'.

Citation fido citation info
jsilve24.github.io/fido/
Bug report File report

Key Metrics

Version 1.0.4
R ≥ 4.1.0
Published 2023-03-24 182 days ago
Needs compilation? yes
License GPL-3
CRAN checks fido results

Downloads

Last 24 hours 0 -100%
Last 7 days 60 +9%
Last 30 days 236 -9%
Last 90 days 778 -21%
Last 365 days 2.992 +54%

Maintainer

Maintainer

Michelle Nixon

pistner@psu.edu

Authors

Justin Silverman

aut

Kim Roche

ctb

Michelle Nixon

ctb / cre

Material

NEWS
Reference manual
Package source

Additional repos

michellepistner.github.io/fidoRepo

Vignettes

Introduction to fido::Pibble
mitigating-pcrbias
intro_fido_basset
Joint Modeling (e.g., Multiomics) with fido::Orthus
picking_priors

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

fido archive

Depends

R ≥ 4.1.0

Imports

Rcpp ≥ 0.12.17
dplyr
ggplot2
purrr
tidybayes
rlang
tidyr

Suggests

testthat ≥ 2.1.0
knitr
rmarkdown
ape
numDeriv
MCMCpack
MicrobeDS
phyloseq

LinkingTo

Rcpp
RcppEigen
RcppNumerical
RcppZiggurat
BH