CRAN/E | fdrDiscreteNull

fdrDiscreteNull

False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions

Installation

About

It is known that current false discovery rate (FDR) procedures can be very conservative when applied to multiple testing in the discrete paradigm where p-values (and test statistics) have discrete and heterogeneous null distributions. This package implements more powerful weighted or adaptive FDR procedures for FDR control and estimation in the discrete paradigm. The package takes in the original data set rather than just the p-values in order to carry out the adjustments for discreteness and heterogeneity of p-value distributions. The package implements methods for two types of test statistics and their p-values: (a) binomial test on if two independent Poisson distributions have the same means, (b) Fisher's exact test on if the conditional distribution is the same as the marginal distribution for two binomial distributions, or on if two independent binomial distributions have the same probabilities of success.

math.wsu.edu/faculty/xchen/welcome.php

Key Metrics

Version 1.4
R ≥ 3.2.0
Published 2020-04-25 1465 days ago
Needs compilation? no
License LGPL-2
License LGPL-2.1
License LGPL-3
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Maintainer

Maintainer

Xiongzhi Chen

xiongzhi.chen@wsu.edu

Authors

Xiongzhi Chen
Rebecca W. Doerge

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

fdrDiscreteNull archive

Depends

R ≥ 3.2.0

Imports

MCMCpack
qvalue