CRAN/E | fcfdr

fcfdr

Flexible cFDR

Installation

About

Provides functions to implement the Flexible cFDR (Hutchinson et al. (2021) doi:10.1371/journal.pgen.1009853) and Binary cFDR (Hutchinson et al. (2021) doi:10.1101/2021.10.21.465274) methodologies to leverage auxiliary data from arbitrary distributions, for example functional genomic data, with GWAS p-values to generate re-weighted p-values.

Key Metrics

Version 1.0.0
R ≥ 3.5.0
Published 2022-02-07 781 days ago
Needs compilation? no
License MIT
License File
CRAN checks fcfdr results

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Maintainer

Maintainer

Anna Hutchinson

annahutchinson1995@gmail.com

Authors

Anna Hutchinson

aut / cre

Chris Wallace

aut

Thomas Willis

ctb / aut

James Liley

ctb

Material

README
NEWS
Reference manual
Package source

Vignettes

Extra Information
Introductory vignette
LDAK vignette
T1D Application

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.5.0

Imports

locfdr
MASS
ggplot2
cowplot
fields
dplyr
spatstat.geom
polyCub
hexbin
bigsplines
data.table
grDevices
Hmisc

Suggests

stats
knitr
rmarkdown
digest
testthat ≥ 3.0.0