CRAN/E | exp2flux

exp2flux

Convert Gene EXPression Data to FBA FLUXes

Installation

About

For a given metabolic model with well formed Gene-Protein-Reaction (GPR) associations and an expressionSet with their associated gene expression values, this package converts gene expression values to the FBA boundaries for each reaction based in the boolean rules described in its associated GPR.

Key Metrics

Version 0.1
Published 2016-10-11 2757 days ago
Needs compilation? no
License GPL-2
CRAN checks exp2flux results

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Maintainer

Maintainer

Daniel Osorio

dcosorioh@unal.edu.co

Authors

Daniel
Osorio[aut

cre

Kelly
Botero[aut

cre

Janneth
Gonzalez[aut
Andres
Pinzon[aut

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Imports

sybil
gage
igraph

Suggests

Biobase