CRAN/E | ecoCopula

ecoCopula

Graphical Modelling and Ordination using Copulas

Installation

About

Creates 'graphs' of species associations (interactions) and ordination biplots from co-occurrence data by fitting discrete gaussian copula graphical models. Methods described in Popovic, GC., Hui, FKC., Warton, DI., (2018) doi:10.1016/j.jmva.2017.12.002.

Citation ecoCopula citation info

Key Metrics

Version 1.0.2
R ≥ 3.5.0
Published 2022-03-02 785 days ago
Needs compilation? no
License LGPL-2.1
License LGPL-3
CRAN checks ecoCopula results

Downloads

Yesterday 12 0%
Last 7 days 66 -12%
Last 30 days 341 +10%
Last 90 days 933 -14%
Last 365 days 3.741 -3%

Maintainer

Maintainer

Gordana Popovic

g.popovic@unsw.edu.au

Authors

Gordana Popovic

aut / cre

David Warton

ctb

Francis K.C. Hui

ctb

Michelle Lim

ctb

Material

README
NEWS
Reference manual
Package source

Vignettes

the_basics

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ecoCopula archive

Depends

R ≥ 3.5.0
mvabund ≥ 4.2

Imports

glasso
plyr
sna
MASS
tweedie
igraph
betareg
doParallel
mgcv
glm2
ordinal
compiler
foreach
stats

Suggests

knitr
rmarkdown
testthat
tidyr
ggplot2
RColorBrewer
ggraph
labdsv
tidygraph

Reverse Imports

ecopower
ecostats