CRAN/E | coxmeg

coxmeg

Cox Mixed-Effects Models for Genome-Wide Association Studies

Installation

About

Fast algorithms for fitting a Cox mixed-effects model for e.g., genome-wide association studies. See Liang He and Alexander Kulminski (2020) doi:10.1534/genetics.119.302940.

Key Metrics

Version 1.1.2
R ≥ 4.1
Published 2023-01-10 466 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks coxmeg results

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Maintainer

Maintainer

Liang He

lianghe@health.sdu.dk

Authors

Liang He
Stephanie Gogarten

Material

Reference manual
Package source

Vignettes

Cox Mixed-Effects Models for Genome-Wide Association Studies
Using GDS files with coxmeg

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-release

x86_64

r-oldrelnot available

x86_64

Old Sources

coxmeg archive

Depends

R ≥ 4.1

Imports

Rcpp ≥ 1.0.7
nloptr
MASS
SNPRelate
SeqArray
rARPACK
stats
Matrix
methods
utils
microbenchmark

Suggests

coxme
gdsfmt
GENESIS
knitr
rmarkdown
testthat

LinkingTo

Rcpp
RcppEigen