CRAN/E | eSIR

eSIR

Extended State-Space SIR Models

Installation

About

An implementation of extended state-space SIR models developed by Song Lab at UM school of Public Health. There are several functions available by 1) including a time-varying transmission modifier, 2) adding a time-dependent quarantine compartment, 3) adding a time-dependent antibody-immunization compartment. Wang L. (2020) doi:10.6339/JDS.202007_18(3).0003.

Key Metrics

Version 0.4.2
R ≥ 3.5.2
Published 2021-12-10 873 days ago
Needs compilation? no
License CC BY 4.0
CRAN checks eSIR results

Downloads

Yesterday 8 -53%
Last 7 days 84 -9%
Last 30 days 286 +15%
Last 90 days 790 -24%
Last 365 days 3.386 +10%

Maintainer

Maintainer

Michael Kleinsasser

biostat-cran-manager@umich.edu

Authors

Lili Wang

aut

Song Lab

aut

(<http://websites.umich.edu/~songlab/>)

Paul Egeler

ctb

(Spectrum Health Office of Research and Education)

Michael Kleinsasser

cre

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

eSIR archive

Depends

R ≥ 3.5.2

Imports

coda ≥ 0.19.3
chron ≥ 2.3.54
data.table ≥ 1.12.0
ggplot2 ≥ 3.2.1
grDevices ≥ 3.5.2
graphics ≥ 3.5.2
gtools ≥ 3.8.1
scales ≥ 1.1.0
stats ≥ 3.5.2
reshape2 ≥ 1.4.3
rjags ≥ 4.10
utils ≥ 3.5.2

Suggests

testthat ≥ 3.0.0