CRAN/E | crosstalkr

crosstalkr

Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks

Installation

About

Provides a general toolkit for drug target identification. We include functionality to reduce large graphs to subgraphs and prioritize nodes. In addition to being optimized for use with generic graphs, we also provides support to analyze protein-protein interactions networks from online repositories. For more details on core method, refer to Weaver et al. (2021) .

Key Metrics

Version 1.0.4
R ≥ 2.10
Published 2023-09-29 209 days ago
Needs compilation? yes
License GPL (≥ 3)
CRAN checks crosstalkr results

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Maintainer

Maintainer

Davis Weaver

davis.weaver@case.edu

Authors

Davis Weaver

aut / cre

(0000-0003-3086-497X)

Material

README
Reference manual
Package source

Vignettes

crosstalkr_vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

crosstalkr archive

Depends

R ≥ 2.10

Imports

rlang
magrittr
withr
readr
dplyr
stringr
tidyr
tibble
igraph ≥ 1.2.0
Matrix
ensembldb
foreach
doParallel
Rcpp
iterators
ggplot2
STRINGdb

Suggests

tidygraph
ggraph
testthat ≥ 2.0.0
knitr
EnsDb.Hsapiens.v86
rmarkdown
here

LinkingTo

Rcpp