CRAN/E | coreCollection

coreCollection

Core Collection

Installation

About

Create a custom sized Core Collection based on a distance matrix and applying the A-NE (accession nearest entry), E-NE (entry nearest entry) or E-E (entry entry) method as introduced in Jansen and van Hintum (2007) doi:10.1007/s00122-006-0433-9 and further elaborated on in Odong, T.L. (2012) . Optionally a list of preselected accessions to be included into the core can be set. For each accession in the computed core, if available nearby accessions are retrievable that can be used as an alternative.

Citation coreCollection citation info

Key Metrics

Version 0.9.5
R ≥ 3.5
Published 2022-12-20 491 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks coreCollection results

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Maintainer

Maintainer

Matthijs Brouwer

matthijs.brouwer@wur.nl

Authors

Matthijs Brouwer

aut / cre

Reinhoud Blok
de

ctb

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 3.5

Imports

Rcpp ≥ 1.0.0
R6 ≥ 2.4.0
methods

Suggests

testthat ≥ 3.0.0
vcfR
adegenet
ggfortify

LinkingTo

Rcpp