CRAN/E | corHMM

corHMM

Hidden Markov Models of Character Evolution

Installation

About

Fits hidden Markov models of discrete character evolution which allow different transition rate classes on different portions of a phylogeny. Beaulieu et al (2013) doi:10.1093/sysbio/syt034.

Key Metrics

Version 2.8
Published 2022-06-13 683 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks corHMM results

Downloads

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Maintainer

Maintainer

Jeremy Beaulieu

jmbeauli@uark.edu

Authors

Jeremy Beaulieu

aut / cre

Brian O'Meara

aut

Jeffrey Oliver

aut

James Boyko

aut

Material

Reference manual
Package source

Vignettes

Generalized corHMM

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

corHMM archive

Depends

ape
nloptr
GenSA

Imports

expm
numDeriv
corpcor
MASS
nnet
phangorn
parallel
viridis
Rmpfr
igraph
phytools

Suggests

testthat
knitr
rmarkdown

Reverse Imports

hisse