CRAN/E | concrete

concrete

Continuous-Time Competing Risks Estimation using Targeted Minimum Loss-Based Estimation (TMLE)

Installation

About

One-step continuous-time Targeted Minimum Loss-Based Estimation (TMLE) for outcome-specific absolute risk estimands in right-censored survival settings with or without competing risks, implementing the methodology described in Rytgaard et al. (2023) doi:10.1111/biom.13856 and Rytgaard and van der Laan (2023) doi:10.1007/s10985-022-09576-2. Currently 'concrete' can be used to estimate the effects of static or dynamic interventions on binary treatments given at baseline, cross-validated initial estimation of treatment propensity is done using the 'SuperLearner' package, and initial estimation of conditional hazards is done using ensembles of Cox regressions from the 'survival' package or Coxnet from the 'glmnet' package.

github.com/imbroglio-dc/concrete
Bug report File report

Key Metrics

Version 1.0.5
R ≥ 3.5.0
Published 2023-09-10 231 days ago
Needs compilation? yes
License GPL (≥ 3)
CRAN checks concrete results

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Maintainer

Maintainer

David Chen

david.chen49@berkeley.edu

Authors

David Chen

aut / cre

Material

README
Reference manual
Package source

Vignettes

Using-concrete

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 3.5.0

Imports

data.table
survival
zoo
origami
SuperLearner
nleqslv
MASS
Rcpp ≥ 1.0.11

Suggests

nnls
xgboost
glmnet
ranger
ggplot2
testthat ≥ 3.0.0
knitr
rmarkdown

LinkingTo

Rcpp
RcppArmadillo