CRAN/E | conStruct

conStruct

Models Spatially Continuous and Discrete Population Genetic Structure

Installation

About

A method for modeling genetic data as a combination of discrete layers, within each of which relatedness may decay continuously with geographic distance. This package contains code for running analyses (which are implemented in the modeling language 'rstan') and visualizing and interpreting output. See the paper for more details on the model and its utility.

System requirements GNU make

Key Metrics

Version 1.0.6
R ≥ 3.4.0
Published 2024-01-08 108 days ago
Needs compilation? yes
License GPL-3
CRAN checks conStruct results

Downloads

Yesterday 15 +36%
Last 7 days 90 +5%
Last 30 days 351 -7%
Last 90 days 1.086 -17%
Last 365 days 4.445 +13%

Maintainer

Maintainer

Gideon Bradburd

bradburd@umich.edu

Authors

Gideon Bradburd

aut / cre

Material

NEWS
ChangeLog
Reference manual
Package source

Vignettes

format-data
model-comparison
run-conStruct
visualize-results

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

conStruct archive

Depends

R ≥ 3.4.0
Rcpp ≥ 0.12.0
methods

Imports

rstan ≥ 2.26.0
rstantools ≥ 1.5.0
caroline
gtools
foreach
parallel
doParallel

Suggests

knitr
rmarkdown
maps

LinkingTo

StanHeaders ≥ 2.26.0
rstan ≥ 2.26.0
BH ≥ 1.66.0
Rcpp ≥ 0.12.0
RcppEigen ≥ 0.3.3.3.0
RcppParallel ≥5.0.1