CRAN/E | bsam

bsam

Bayesian State-Space Models for Animal Movement

Installation

About

Tools to fit Bayesian state-space models to animal tracking data. Models are provided for location filtering, location filtering and behavioural state estimation, and their hierarchical versions. The models are primarily intended for fitting to ARGOS satellite tracking data but options exist to fit to other tracking data types. For Global Positioning System data, consider the 'moveHMM' package. Simplified Markov Chain Monte Carlo convergence diagnostic plotting is provided but users are encouraged to explore tools available in packages such as 'coda' and 'boa'.

Citation bsam citation info
<github.com/ianjonsen/bsam>
System requirements JAGS (>= 4.3.0)
Bug report File report

Key Metrics

Version 1.1.3
R ≥ 3.6.0
Published 2020-09-01 1332 days ago
Needs compilation? no
License GPL-2
CRAN checks bsam results

Downloads

Yesterday 17 -55%
Last 7 days 140 -20%
Last 30 days 621 +1%
Last 90 days 1.822 +9%
Last 365 days 6.702 +6%

Maintainer

Maintainer

Ian Jonsen

ian.jonsen@mq.edu.au

Authors

Ian Jonsen

aut / cre

Sophie Bestley

ctb

Simon Wotherspoon

ctb

Michael Sumner

ctb

Joanna Mills Flemming

ctb

Material

README
NEWS
Reference manual
Package source

In Views

SpatioTemporal
Tracking

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

bsam archive

Depends

R ≥ 3.6.0
rjags ≥ 4-10

Imports

coda ≥ 0.19-3
dplyr ≥ 1.0.0
ggplot2 ≥ 3.3.2
gridExtra ≥ 2.3
msm ≥ 1.6.8
mvtnorm ≥ 1.1-1
rworldxtra ≥ 1.01
sp ≥ 1.2-3
tibble ≥ 3.0.1
lubridate ≥ 1.7.9