CRAN/E | breathtestcore

breathtestcore

Core Functions to Read and Fit 13c Time Series from Breath Tests

Installation

About

Reads several formats of 13C data (IRIS/Wagner, BreathID) and CSV. Creates artificial sample data for testing. Fits Maes/Ghoos, Bluck-Coward self-correcting formula using 'nls', 'nlme'. Methods to fit breath test curves with Bayesian Stan methods are refactored to package 'breathteststan'. For a Shiny GUI, see package 'dmenne/breathtestshiny' on github.

github.com/dmenne/breathtestcore
dmenne.github.io/breathtestcore/
System requirements pandoc
Bug report File report

Key Metrics

Version 0.8.7
R ≥ 4.0.0
Published 2024-01-24 64 days ago
Needs compilation? no
License GPL-3
CRAN checks breathtestcore results

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Maintainer

Maintainer

Dieter Menne

dieter.menne@menne-biomed.de

Authors

Dieter Menne

aut / cre

Menne Biomed Consulting Tuebingen

cph

Benjamin Misselwitz

fnd

Mark Fox

fnd

Andreas Steingoetter

dtc

University Hospital of Zurich
Dep. Gastroenterology

fnd / dtc

Material

Reference manual
Package source

Vignettes

Data formats
Methods and concepts

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

breathtestcore archive

Depends

R ≥ 4.0.0

Imports

assertthat
dplyr
ggfittext
ggplot2
broom ≥ 0.7.0
graphics
grid
MASS
methods
multcomp
nlme
purrr
readr
readxl
signal
stats
stringr
tibble ≥ 3.0.0
tidyr
tools
utils
xml2

Suggests

base
gridExtra
knitr
rmarkdown
testthat ≥ 2.99
breathteststan
covr
parallelly

Reverse Imports

breathteststan