CRAN/E | biocompute

biocompute

Create and Manipulate BioCompute Objects

Installation

About

Tools to create, validate, and export BioCompute Objects described in King et al. (2019) doi:10.17605/osf.io/h59uh. Users can encode information in data frames, and compose BioCompute Objects from the domains defined by the standard. A checksum validator and a JSON schema validator are provided. This package also supports exporting BioCompute Objects as JSON, PDF, HTML, or 'Word' documents, and exporting to cloud-based platforms.

sbg.github.io/biocompute/
github.com/sbg/biocompute
Bug report File report

Key Metrics

Version 1.1.1
Published 2022-05-03 718 days ago
Needs compilation? no
License AGPL-3
CRAN checks biocompute results

Downloads

Yesterday 22
Last 7 days 43 0%
Last 30 days 227 -13%
Last 90 days 916 +32%
Last 365 days 3.034 -29%

Maintainer

Maintainer

Soner Koc

soner.koc@sevenbridges.com

Authors

Soner Koc

aut / cre

Jeffrey Grover

aut

Nan Xiao

aut

Dennis Dean

aut

Seven Bridges Genomics

cph / fnd

Material

README
NEWS
Reference manual
Package source

Vignettes

Authoring Biocompute Objects with R: A Case Study
An Introduction to BioCompute Objects with R

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

biocompute archive

Imports

methods
jsonlite
yaml
digest
uuid
jsonvalidate
httr
curl
crayon
cli
stringr
magrittr
rmarkdown

Suggests

knitr