CRAN/E | biclustermd

biclustermd

Biclustering with Missing Data

Installation

About

Biclustering is a statistical learning technique that simultaneously partitions and clusters rows and columns of a data matrix. Since the solution space of biclustering is in infeasible to completely search with current computational mechanisms, this package uses a greedy heuristic. The algorithm featured in this package is, to the best our knowledge, the first biclustering algorithm to work on data with missing values. Li, J., Reisner, J., Pham, H., Olafsson, S., and Vardeman, S. (2020) Biclustering with Missing Data. Information Sciences, 510, 304–316.

github.com/jreisner/biclustermd
Bug report File report

Key Metrics

Version 0.2.3
R ≥ 3.5.0
Published 2021-06-17 1042 days ago
Needs compilation? no
License MIT
License File
CRAN checks biclustermd results

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Maintainer

Maintainer

John Reisner

johntreisner@gmail.com

Authors

John Reisner

cre / aut / cph

Hieu Pham

ctb / cph

Jing Li

ctb / cph

Material

README
Reference manual
Package source

In Views

MissingData

Vignettes

Biclustering Airport Delay Data

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

biclustermd archive

Depends

ggplot2 ≥ 3.0.0
R ≥ 3.5.0
tidyr ≥ 0.8.1

Imports

biclust ≥ 2.0.1
doParallel ≥ 1.0.14
dplyr ≥ 0.7.6
foreach ≥ 1.4.4
magrittr ≥ 1.5
nycflights13 ≥ 1.0.0
phyclust ≥ 0.1-24

Suggests

knitr
rmarkdown
testthat