baker

Provides functions to specify, fit and visualize nested partially-latent class models ( Wu, Deloria-Knoll, Hammitt, and Zeger (2016) doi:10.1111/rssc.12101; Wu, Deloria-Knoll, and Zeger (2017) doi:10.1093/biostatistics/kxw037; Wu and Chen (2021) doi:10.1002/sim.8804) for inference of population disease etiology and individual diagnosis. In the motivating Pneumonia Etiology Research for Child Health (PERCH) study, because both quantities of interest sum to one hundred percent, the PERCH scientists frequently refer to them as population etiology pie and individual etiology pie, hence the name of the package.