CRAN/E | adaptiveGPCA

adaptiveGPCA

Adaptive Generalized PCA

Installation

About

Implements adaptive gPCA, as described in: Fukuyama, J. (2017) . The package also includes functionality for applying the method to 'phyloseq' objects so that the method can be easily applied to microbiome data and a 'shiny' app for interactive visualization.

Key Metrics

Version 0.1.3
R ≥ 3.1.0
Published 2022-12-08 504 days ago
Needs compilation? no
License AGPL-3
CRAN checks adaptiveGPCA results

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Maintainer

Maintainer

Julia Fukuyama

julia.fukuyama@gmail.com

Authors

Julia Fukuyama

aut / cre

Material

Reference manual
Package source

Vignettes

adaptvieGPCA vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

adaptiveGPCA archive

Depends

R ≥ 3.1.0

Imports

ape ≥ 3.1.4
ggplot2 ≥ 1.0.0
shiny ≥ 1.0.0
phyloseq ≥ 1.14.0

Suggests

knitr
rmarkdown

Reverse Suggests

treeDA