CRAN/E | UNCOVER

UNCOVER

Utilising Normalisation Constant Optimisation via Edge Removal (UNCOVER)

Installation

About

Model data with a suspected clustering structure (either in co-variate space, regression space or both) using a Bayesian product model with a logistic regression likelihood. Observations are represented graphically and clusters are formed through various edge removals or additions. Cluster quality is assessed through the log Bayesian evidence of the overall model, which is estimated using either a Sequential Monte Carlo sampler or a suitable transformation of the Bayesian Information Criterion as a fast approximation of the former. The internal Iterated Batch Importance Sampling scheme (Chopin (2002 doi:10.1093/biomet/89.3.539)) is made available as a free standing function.

Key Metrics

Version 1.1.0
Published 2023-08-25 248 days ago
Needs compilation? no
License GPL-2
CRAN checks UNCOVER results

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Maintainer

Maintainer

Samuel Emerson

samuel.emerson@hotmail.co.uk

Authors

Samuel Emerson

aut / cre

Material

NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

UNCOVER archive

Imports

mvnfast
igraph
crayon
memoise
GGally
ggplot2
ggpubr
scales
stats
cachem
ggnewscale