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Implements a three-dimensional stochastic model of cancer growth and mutation similar to the one described in Waclaw et al. (2015) doi:10.1038/nature14971. Allows for interactive 3D visualizations of the simulated tumor. Provides a comprehensive summary of the spatial distribution of mutants within the tumor. Contains functions which create synthetic sequencing datasets from the generated tumor.
github.com/phillipnicol/SITH | |
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