CRAN/E | RNeXML

RNeXML

Semantically Rich I/O for the 'NeXML' Format

Installation

About

Provides access to phyloinformatic data in 'NeXML' format. The package should add new functionality to R such as the possibility to manipulate 'NeXML' objects in more various and refined way and compatibility with 'ape' objects.

Citation RNeXML citation info
docs.ropensci.org/RNeXML/
github.com/ropensci/RNeXML
Bug report File report

Key Metrics

Version 2.4.11
R ≥ 3.0.0
Published 2023-02-01 449 days ago
Needs compilation? no
License BSD_3_clause
License File
CRAN checks RNeXML results
Language en-US

Downloads

Yesterday 168 0%
Last 7 days 604 -33%
Last 30 days 3.375 -29%
Last 90 days 11.475 -18%
Last 365 days 49.372 -28%

Maintainer

Maintainer

Carl Boettiger

cboettig@gmail.com

Authors

Carl Boettiger

cre / aut

Scott Chamberlain

aut

Hilmar Lapp

aut

Kseniia Shumelchyk

aut

Rutger Vos

aut

Material

README
NEWS
Reference manual
Package source

In Views

Phylogenetics

Vignettes

The nexml S4 Object
A Brief Introduction to RNeXMLL
Handling Metadata in RNeXML
Extending NeXML to simmap
SPARQL with RNeXML

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

RNeXML archive

Depends

R ≥ 3.0.0
ape ≥ 3.1
methods ≥ 3.0.0

Imports

XML ≥ 3.95
plyr ≥ 1.8
reshape2 ≥ 1.2.2
httr ≥0.3
uuid ≥ 0.1-1
dplyr ≥ 0.7.0
tidyr ≥ 0.3.1
stringr ≥ 1.0
stringi
xml2
rlang

Suggests

spelling
rdflib
geiger ≥ 2.0
phytools ≥ 0.3.93
knitr ≥ 1.5
rfigshare ≥ 0.3.0
knitcitations ≥ 1.0.1
testthat ≥ 0.10.0
rmarkdown ≥ 0.3.3
xslt
covr
taxalight
progress

Reverse Imports

phylobase

Reverse Suggests

rotl