CRAN/E | RNOmni

RNOmni

Rank Normal Transformation Omnibus Test

Installation

About

Inverse normal transformation (INT) based genetic association testing. These tests are recommend for continuous traits with non-normally distributed residuals. INT-based tests robustly control the type I error in settings where standard linear regression does not, as when the residual distribution exhibits excess skew or kurtosis. Moreover, INT-based tests outperform standard linear regression in terms of power. These tests may be classified into two types. In direct INT (D-INT), the phenotype is itself transformed. In indirect INT (I-INT), phenotypic residuals are transformed. The omnibus test (O-INT) adaptively combines D-INT and I-INT into a single robust and statistically powerful approach. See McCaw ZR, Lane JM, Saxena R, Redline S, Lin X. "Operating characteristics of the rank-based inverse normal transformation for quantitative trait analysis in genome-wide association studies" doi:10.1111/biom.13214.

Key Metrics

Version 1.0.1.2
R ≥ 3.2.2
Published 2023-09-11 238 days ago
Needs compilation? yes
License GPL-3
CRAN checks RNOmni results

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Maintainer

Maintainer

Zachary McCaw

zmccaw@alumni.harvard.edu

Authors

Zachary McCaw

aut / cre

Material

NEWS
Reference manual
Package source

Vignettes

Rank Normal Omnibus Association Test

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

RNOmni archive

Depends

R ≥ 3.2.2

Imports

plyr
Rcpp
stats

Suggests

testthat ≥ 3.0.0
withr
R.rsp

LinkingTo

Rcpp
RcppArmadillo

Reverse Depends

EWCE

Reverse Imports

AllelicSeries