CRAN/E | RESET

RESET

Reconstruction Set Test

Installation

About

Contains logic for sample-level variable set scoring using randomized reduced rank reconstruction error. Frost, H. Robert (2023) "Reconstruction Set Test (RESET): a computationally efficient method for single sample gene set testing based on randomized reduced rank reconstruction error" doi:10.1101/2023.04.03.535366.

Key Metrics

Version 1.0.0
R ≥ 3.6.0
Published 2024-03-06 55 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks RESET results

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Maintainer

Maintainer

H. Robert Frost

rob.frost@dartmouth.edu

Authors

H. Robert Frost

aut / cre

Material

NEWS
Reference manual
Package source

Vignettes

10x PBMC 3k log normalization MSigDB BioCarta collection example
Seurat pbmc_small log normalization example

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

RESET archive

Depends

R ≥ 3.6.0
Matrix

Imports

methods ≥ 3.6.0

Suggests

Seurat ≥ 4.0.0
SeuratObject ≥ 4.0.0
sctransform ≥0.3.2