CRAN/E | PopGenHelpR

PopGenHelpR

Streamline Population Genomic and Genetic Analyses

Installation

About

Estimate commonly used population genomic statistics and generate publication quality figures. The current version of 'PopGenHelpR' uses vcf and csv files to generate output, however, future implementations will expand the input file type options.

kfarleigh.github.io/PopGenHelpR/
Bug report File report

Key Metrics

Version 1.0.0
R ≥ 2.10
Published 2023-02-13 439 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks PopGenHelpR results

Downloads

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Maintainer

Maintainer

Keaka Farleigh

keakafarleigh@gmail.com

Authors

Keaka Farleigh

aut / cph / cre

Mason Murphy

aut / cph / ctb

Christopher Blair

aut / cph / ctb

Tereza Jezkova

aut / cph / ctb

Material

README
NEWS
Reference manual
Package source

Vignettes

PopGenHelpR_vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 2.10

Imports

adegenet
dartR
dplyr
ggplot2
graphics
gstat
hierfstat
magrittr
poppr
raster
reshape2
rnaturalearth
scatterpie
StAMPP
stats
sp
spdep
utils
vcfR

Suggests

knitr
rmarkdown
testthat ≥ 3.0.0