Installation
About
Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the MaxQuant software suite (from .txt files) or mzTab files (ideally from OpenMS 'QualityControl' tool). Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format. Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) doi:10.1021/acs.jproteome.5b00780.
| Citation | PTXQC citation info |
| github.com/cbielow/PTXQC | |
| System requirements | pandoc (http://pandoc.org) for building Vignettes and output reports as HTML |
| Bug report | File report |
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