CRAN/E | OpenSpecy

OpenSpecy

Analyze, Process, Identify, and Share Raman and (FT)IR Spectra

Installation

About

Raman and (FT)IR spectral analysis tool for plastic particles and other environmental samples (Cowger et al. 2021, doi:10.1021/acs.analchem.1c00123). With read_any(), Open Specy provides a single function for reading individual, batch, or map spectral data files like .asp, .csv, .jdx, .spc, .spa, .0, and .zip. process_spec() simplifies processing spectra, including smoothing, baseline correction, range restriction and flattening, intensity conversions, wavenumber alignment, and min-max normalization. Spectra can be identified in batch using an onboard reference library (Cowger et al. 2020, doi:10.1177/0003702820929064) using match_spec(). A Shiny app is available via run_app() or online at .

github.com/wincowgerDEV/OpenSpecy-package/
wincowger.com/OpenSpecy-package/
Bug report File report

Key Metrics

Version 1.0.8
R ≥ 4.1.0
Published 2024-03-14 43 days ago
Needs compilation? no
License CC BY 4.0
CRAN checks OpenSpecy results

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Maintainer

Maintainer

Win Cowger

wincowger@gmail.com

Authors

Win Cowger

cre / aut / dtc

Zacharias Steinmetz

aut

Nick Leong

aut

Andrea Faltynkova

aut / dtc

Hannah Sherrod

aut

Andrew B Gray

ctb

Hannah Hapich

ctb

Jennifer Lynch

ctb / dtc

Hannah De Frond

ctb / dtc

Keenan Munno

ctb / dtc

Chelsea Rochman

ctb / dtc

Sebastian Primpke

ctb / dtc

Orestis Herodotou

ctb

Mary C Norris

ctb

Christine M Knauss

ctb

Aleksandra Karapetrova

ctb / dtc / rev

Vesna Teofilovic

ctb

Laura A. T. Markley

ctb

Shreyas Patankar

ctb / dtc

Rachel Kozloski

ctb / dtc

Samiksha Singh

ctb

Katherine Lasdin

ctb

Cristiane Vidal

ctb

Clare Murphy-Hagan

ctb

Philipp Baumann

ctb

Pierre Roudier

ctb

National Renewable Energy Laboratory

fnd

Possibility Lab

fnd

Material

README
NEWS
Reference manual
Package source

Vignettes

Open Specy Package Tutorial

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

OpenSpecy archive

Depends

R ≥ 4.1.0

Imports

methods
data.table
jsonlite
yaml
osfr
caTools
hyperSpec
mmand
plotly
digest
signal
glmnet
shiny

Suggests

knitr
rmarkdown
testthat ≥ 3.1.9
config
qs
shinyjs
shinyWidgets
bs4Dash
dplyr
ggplot2
DT
curl
aws.s3
mongolite
loggit