CRAN/E | OlinkAnalyze

OlinkAnalyze

Facilitate Analysis of Proteomic Data from Olink

Installation

About

A collection of functions to facilitate analysis of proteomic data from Olink, primarily NPX data that has been exported from Olink Software. The functions also work on QUANT data from Olink by log- transforming the QUANT data. The functions are focused on reading data, facilitating data wrangling and quality control analysis, performing statistical analysis and generating figures to visualize the results of the statistical analysis. The goal of this package is to help users extract biological insights from proteomic data run on the Olink platform.

olink.com/ https://github.com/Olink-Proteomics/OlinkRPackage
olink.com/ https://github.com/Olink-Proteomics/OlinkRPackage

Key Metrics

Version 3.7.0
R ≥ 4.1.0
Published 2024-02-22 63 days ago
Needs compilation? no
License AGPL (≥ 3)
CRAN checks OlinkAnalyze results

Downloads

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Last 365 days 10.278 +28%

Maintainer

Maintainer

Kathleen Nevola

biostattools@olink.com

Authors

Kathleen Nevola

aut / cre

(kathy-nevola)

Marianne Sandin

aut

(marisand)

Jamey Guess

aut

(jrguess)

Simon Forsberg

aut

(simfor)

Christoffer Cambronero

aut

(Orbmac)

Pascal Pucholt

aut

(AskPascal)

Boxi Zhang

aut

(boxizhang)

Masoumeh Sheikhi

aut

(MasoumehSheikhi)

Klev Diamanti

aut

(klevdiamanti)

Amrita Kar

aut

(amrita-kar)

Lei Conze

aut

(leiliuC)

Kristian Hodén

ctb

(kristianHoden)

Per Eriksson

ctb

(b_watcher)

Nicola Moloney

ctb

Britta Lötstedt

ctb

Emmett Sprecher

ctb

Jessica Barbagallo

ctb

(jbarbagallo)

Olof Mansson

ctr

(olofmansson)

Ola Caster

ctb

(OlaCaster)

Kristyn Chin

ctb

(kristynchin-olink)

Olink

cph / fnd

Contacts

Material

NEWS
Reference manual
Package source

Vignettes

Outlier Exclusion Vignette
Olink® Analyze Vignette
Introduction to bridging Olink® NPX datasets
Plate Randomization Vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

OlinkAnalyze archive

Depends

R ≥ 4.1.0

Imports

broom
car
dplyr
emmeans
forcats
generics
ggplot2
ggpubr
ggrepel
grDevices
grid
lme4
lmerTest
magrittr
methods
readxl
rlang
rstatix
stats
stringr
tibble
tidyr
tidyselect
tools
utils
zip

Suggests

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