CRAN/E | MicrobiomeStat

MicrobiomeStat

Statistical Methods for Microbiome Compositional Data

Installation

About

A suite of methods for powerful and robust microbiome data analysis addressing zero-inflation, phylogenetic structure and compositional effects (Zhou et al. (2021)). The methods can be applied to the analysis of other (high-dimensional) compositional data arising from sequencing experiments.

Key Metrics

Version 1.1
R ≥ 3.5.0
Published 2022-01-24 796 days ago
Needs compilation? yes
License GPL-3
CRAN checks MicrobiomeStat results

Downloads

Yesterday 38 0%
Last 7 days 201 -25%
Last 30 days 986 -7%
Last 90 days 2.977 +7%
Last 365 days 11.008 +158%

Maintainer

Maintainer

Jun Chen

chen.jun2@mayo.edu

Authors

Xianyang Zhang

aut

Jun Chen

aut / cre

Huijuan Zhou

ctb

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

MicrobiomeStat archive

Depends

R ≥ 3.5.0

Imports

ggplot2
matrixStats
Matrix
parallel
stats
utils
statmod
MASS
ggrepel
lmerTest
foreach
modeest
phyloseq