CRAN/E | MiSPU

MiSPU

Microbiome Based Sum of Powered Score (MiSPU) Tests

Installation

About

There is an increasing interest in investigating how the compositions of microbial communities are associated with human health and disease. In this package, we present a novel global testing method called aMiSPU, that is highly adaptive and thus high powered across various scenarios, alleviating the issue with the choice of a phylogenetic distance. Our simulations and real data analysis demonstrated that aMiSPU test was often more powerful than several competing methods while correctly controlling type I error rates.

Key Metrics

Version 1.0
R ≥ 3.2.3
Published 2016-03-18 2959 days ago
Needs compilation? yes
License GPL-2
CRAN checks MiSPU results

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Maintainer

Maintainer

Chong Wu

wuxx0845@umn.edu

Authors

Chong Wu
Wei Pan

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.2.3
vegan
ape
aSPU
cluster

Imports

Rcpp ≥ 0.12.1

Suggests

ade4

LinkingTo

Rcpp
RcppArmadillo