CRAN/E | MMINP

MMINP

Microbe-Metabolite Interactions-Based Metabolic Profiles Predictor

Installation

About

Implements a computational framework to predict microbial community-based metabolic profiles with 'O2PLS' model. It provides procedures of model training and prediction. Paired microbiome and metabolome data are needed for modeling, and the trained model can be applied to predict metabolites of analogous environments using new microbial feature abundances.

github.com/YuLab-SMU/MMINP
Bug report File report

Key Metrics

Version 0.1.0
R ≥ 4.1.0
Published 2022-07-04 662 days ago
Needs compilation? no
License GPL (≥ 3.0)
CRAN checks MMINP results

Downloads

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Maintainer

Maintainer

Wenli Tang

1071429394@qq.com

Authors

Wenli Tang

aut / cre

Guangchuang Yu

aut / ths

Material

README
Reference manual
Package source

Vignettes

MMINP

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 4.1.0

Imports

magrittr ≥ 2.0.1
OmicsPLS ≥ 2.0.2
utils
stats

Suggests

rmarkdown
knitr
prettydoc
testthat ≥ 3.0.0