CRAN/E | MLMOI

MLMOI

Estimating Frequencies, Prevalence and Multiplicity of Infection

Installation

About

The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) doi:10.1371/journal.pone.0194148, and Schneider and Escalante (2014) doi:10.1371/journal.pone.0097899. Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.

Key Metrics

Version 0.1.1
R ≥ 3.3.0
Published 2020-01-10 1580 days ago
Needs compilation? no
License GPL-3
CRAN checks MLMOI results

Downloads

Yesterday 4 -50%
Last 7 days 34 -43%
Last 30 days 151 +10%
Last 90 days 377 -27%
Last 365 days 1.358 -41%

Maintainer

Maintainer

Meraj Hashemi

mhashemi@hs-mittweida.de

Authors

Meraj Hashemi

cre / aut / com

Kristan Schneider

aut / ths

Material

Reference manual
Package source

Vignettes

Standard Ambiguity Codes
Data Import Check-list
Examples
Arguments of Import Function

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.3.0

Imports

XLConnect ≥ 0.2-15
rJava ≥ 0.9-10
Rdpack ≥ 0.10-1
Rmpfr ≥ 0.7-1

Suggests

knitr
rmarkdown