CRAN/E | MGDrivE2

MGDrivE2

Mosquito Gene Drive Explorer 2

Installation

About

A simulation modeling framework which significantly extends capabilities from the 'MGDrivE' simulation package via a new mathematical and computational framework based on stochastic Petri nets. For more information about 'MGDrivE', see our publication: Sánchez et al. (2019) doi:10.1111/2041-210X.13318 Some of the notable capabilities of 'MGDrivE2' include: incorporation of human populations, epidemiological dynamics, time-varying parameters, and a continuous-time simulation framework with various sampling algorithms for both deterministic and stochastic interpretations. 'MGDrivE2' relies on the genetic inheritance structures provided in package 'MGDrivE', so we suggest installing that package initially.

marshalllab.github.io/MGDrivE/docs_v2/index.html
www.marshalllab.com/
Bug report File report

Key Metrics

Version 2.1.0
R ≥ 3.1.0
Published 2023-03-04 412 days ago
Needs compilation? no
License GPL-3
CRAN checks MGDrivE2 results

Downloads

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Maintainer

Maintainer

Agastya Mondal

amondal13@gmail.com

Authors

Sean L. Wu

aut

Jared B. Bennett

aut

Héctor Manuel Sánchez Castellanos

ctb

Tomás M. León

ctb

Andrew J. Dolgert

ctb

John M. Marshall

aut

Agastya Mondal

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

adv-topics
seir-dynamics
epi-network
epi-node-imperial
epi-node-decoupled
epi-node
inhomogeneous
lifecycle-network
lifecycle-node

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

MGDrivE2 archive

Depends

R ≥ 3.1.0

Imports

Matrix
deSolve
statmod

Suggests

MGDrivE
knitr
rmarkdown
markdown
ggplot2