CRAN/E | MAGEE

MAGEE

Mixed Model Association Test for GEne-Environment Interaction

Installation

About

Use a 'glmmkin' class object (GMMAT package) from the null model to perform generalized linear mixed model-based single-variant and variant set main effect tests, gene-environment interaction tests, and joint tests for association, as proposed in Wang et al. (2020) doi:10.1002/gepi.22351.

Copyright See COPYRIGHTS for details. MAGEE copyright details

Key Metrics

Version 1.4.1
R ≥ 3.2.0
Published 2024-04-28 3 days ago
Needs compilation? yes
License GPL (≥ 3)
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Maintainer

Maintainer

Han Chen

han.chen.2@uth.tmc.edu

Authors

Xinyu Wang

aut

Han Chen

aut / cre

Duy Pham

aut

Kenneth Westerman

ctb

Cong Pan

aut

Eric Biggers

ctb / cph

(Author and copyright holder of included libdeflate library)

Tino Reichardt

ctb / cph

(Author and copyright holder of threading code used in the included Zstandard (zstd) library)

Meta Platforms
Inc.
affiliates

cph

(Copyright holder of included Zstandard (zstd) library)

Material

Reference manual
Package source

Vignettes

MAGEE

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

MAGEE archive

Depends

R ≥ 3.2.0

Imports

Rcpp
Matrix
parallel
MASS
foreach
GMMAT
CompQuadForm
data.table

Suggests

doMC
SeqArray
SeqVarTools
testthat

LinkingTo

Rcpp
RcppArmadillo