CRAN/E | ISOpureR

ISOpureR

Deconvolution of Tumour Profiles

Installation

About

Deconvolution of mixed tumour profiles into normal and cancer for each patient, using the ISOpure algorithm in Quon et al. Genome Medicine, 2013 5:29. Deconvolution requires mixed tumour profiles and a set of unmatched "basis" normal profiles.

Key Metrics

Version 1.1.3
R ≥ 3.1.1
Published 2019-05-11 1809 days ago
Needs compilation? yes
License GPL-2
CRAN checks ISOpureR results

Downloads

Yesterday 4 0%
Last 7 days 62 +15%
Last 30 days 243 -16%
Last 90 days 1.000 +14%
Last 365 days 3.303 -9%

Maintainer

Maintainer

Paul C Boutros

pboutros@mednet.ucla.edu

Authors

Gerald Quon

aut

Catalina V Anghel

aut / trl

Syed Haider

aut

Francis Nguyen

aut

Amit G Deshwar

aut

Quaid D Morris

aut

Paul C Boutros

aut / cre

Material

NEWS
Reference manual
Package source

Vignettes

Guide for using ISOpureR

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ISOpureR archive

Depends

R ≥ 3.1.1

Imports

Rcpp ≥ 0.11.3
stats
futile.logger

Suggests

knitr

LinkingTo

Rcpp
RcppEigen ≥ 0.3.2.2.0