CRAN/E | GenomeAdmixR

GenomeAdmixR

Simulate Admixture of Genomes

Installation

About

Individual-based simulations forward in time, simulating how patterns in ancestry along the genome change after admixture. Full description can be found in Janzen (2021) doi:10.1111/2041-210X.13612.

github.com/thijsjanzen/GenomeAdmixR
System requirements C++14
Bug report File report

Key Metrics

Version 2.1.7
R ≥ 2.10
Published 2022-03-01 781 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks GenomeAdmixR results

Downloads

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Last 365 days 2.916 -1%

Maintainer

Maintainer

Thijs Janzen

thijsjanzen@gmail.com

Authors

Thijs Janzen

aut / cre

Fernando Diaz G.

ctb

Richèl J.C. Bilderbeek

ctb

Material

README
Reference manual
Package source

Vignettes

Demonstrate isofemales
Empirical data
Demonstrate joyplot
Visualization
Walkthrough

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

GenomeAdmixR archive

Depends

R ≥ 2.10

Imports

ggplot2
ggridges
hierfstat
methods
Rcpp
RcppParallel
rlang
stringr
tibble
vcfR

Suggests

dplyr
junctions
knitr
magrittr
rmarkdown
testit
testthat
pbapply

LinkingTo

Rcpp
RcppArmadillo
RcppParallel