CRAN/E | GeneNet

GeneNet

Modeling and Inferring Gene Networks

Installation

About

Analyzes gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).

strimmerlab.github.io/software/genenet/

Key Metrics

Version 1.2.16
R ≥ 3.0.2
Published 2021-11-14 887 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks GeneNet results

Downloads

Yesterday 20
Last 7 days 83 -42%
Last 30 days 558 -34%
Last 90 days 2.424 +4%
Last 365 days 9.004 -17%

Maintainer

Maintainer

Korbinian Strimmer

strimmerlab@gmail.com

Authors

Juliane Schaefer
Rainer Opgen-Rhein
Korbinian Strimmer.

Material

NEWS
Reference manual
Package source

In Views

GraphicalModels

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

GeneNet archive

Depends

R ≥ 3.0.2
corpcor ≥ 1.6.10
longitudinal ≥ 1.1.13
fdrtool ≥ 1.2.17

Imports

stats
grDevices

Suggests

graph
Rgraphviz

Reverse Depends

splineTimeR

Reverse Imports

ccid
MetNet
nethet

Reverse Suggests

dcanr
ebdbNet