CRAN/E | GWASinlps

GWASinlps

Non-Local Prior Based Iterative Variable Selection Tool for Genome-Wide Association Studies

Installation

About

Performs variable selection with data from Genome-wide association studies (GWAS), or other high-dimensional data with continuous, binary or survival outcomes, combining in an iterative framework the computational efficiency of the structured screen-and-select variable selection strategy based on some association learning and the parsimonious uncertainty quantification provided by the use of non-local priors (see Sanyal et al., 2019 doi:10.1093/bioinformatics/bty472).

nilotpalsanyal.github.io/GWASinlps/
Bug report File report

Key Metrics

Version 2.2
Published 2022-11-23 513 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks GWASinlps results

Downloads

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Maintainer

Maintainer

Nilotpal Sanyal

nilotpal.sanyal@gmail.com

Authors

Nilotpal Sanyal

aut / cre

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

GWASinlps archive

Depends

mombf

Imports

Rcpp ≥ 1.0.9
RcppArmadillo
fastglm
horseshoe
survival

Suggests

glmnet

LinkingTo

Rcpp
RcppArmadillo